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Biology 15 Online
OpenStudy (anonymous):

What percentage gel should be used if you want to separate DNA fragments that are 25,000 bp , 21,000 bp, 10,000 bp and 6,000 bp?

OpenStudy (anonymous):

hvent learnd it :(

OpenStudy (karatechopper):

Sorry, I haven't learnt this either.

OpenStudy (frostbite):

Hmmm what kind of gel? almost guessing agarose?

OpenStudy (frostbite):

If we don't have this factor it can be hard to know becuase the driving force of the molecule or DNA is given by: \[f=6 \pi \eta r\] Here f is the driving force, η is the viscosity of the medium and r is the radius of a sphere.

OpenStudy (frostbite):

But if using a agarose gel I would say about 0,5 % agarose, that should cover 1k to 30k.

OpenStudy (anonymous):

oh wow, thank you! thank you so much!!!!

OpenStudy (frostbite):

and standard plate btw. ;)

OpenStudy (anonymous):

@Frostbite dude continue helping her :D please! shes in ap bio XD

OpenStudy (frostbite):

Not sure I follow?

OpenStudy (anonymous):

Oh. She's Advanced Placement Biology and she needs help haha.

OpenStudy (anonymous):

I'm in ap bio and i don't get this lab report at all haha

OpenStudy (frostbite):

Well this is college bio, so I wonder if you don't have any tables to look in, I only found it, becuase I had a old table from a prof of mine. The eqautions however is stright on ;)

OpenStudy (anonymous):

ARTI ASK THE NEXT QUESTION CHILD

OpenStudy (anonymous):

@Frostbite could you help me with some other questions? :)

OpenStudy (frostbite):

Maybe, I'll give it a shot.

OpenStudy (anonymous):

you perform a restiction digest that should yield 1400 bp, 1080 bp, and 400 bp fragments. You check the restiction digest by running it on a gel that is 1.5 %, the correct percentage. but you're in a rush and only partially run the gel you also forget to load the marker

OpenStudy (anonymous):

when you stain the gel you only see three bands in the lane you loaded. The second band from the well is more intense than thr others and looks like a doublet. which 2 fragements make up the double? why? what could you do to further separate the fragemnts to verify this?

OpenStudy (frostbite):

Hmmm, not quite sure about this sorry.

OpenStudy (anonymous):

oh, okay thank you though! how about this one ----> if you want to run gel electrophoresis at 100 v for two hours instead of one (which is how long it should take) what should you do?

OpenStudy (frostbite):

Hmmm an increase in running time will allow the bands to separate even more... wich you ofcuase need to take into account if you make a aproximation. Beside from that, I most again say I'm not sure.

OpenStudy (frostbite):

Might also need to adjust some equations if you have some formular that have bps as a function of length of bands travel.

OpenStudy (anonymous):

i was thinking that you could rin it at half the voltage (50 v)

OpenStudy (frostbite):

Oh, then i misunderstod well depends if voltage and time is porportional ;)

OpenStudy (anonymous):

haha i don't really know. I'm just going to out that down and hope for the best!

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