Atoms, Protons, Neutrons, Electrons, Basic Atomic Structure and Fundamentals of Bonding Tutorial Creator of Tutorial: greatlife44
The basics, every atom contains protons, neutrons, and electrons.
protons and neutrons are found in the nucleus of the atom, while electrons are contained in orbitals, well most likely to be found in orbitals because we can't know for certain both the position and momentum of an electron, but essentially protons have a positive charge, neutrons have no charge, and electrons have a negative charge.
you can see in the figure below for carbon, the electrons will be found in shells/orbitals, while the protons and neutrons are in the nucleus. essentially, the nucleus is positively charged since neutrons have no charge.

You can see for yourself below:
Essentially, for an atom let's say carbon, has 6 electrons. Remember every element in the periodic table is electrically neutral. what does this mean? it means that every element has a neutral charge because the number of electrons = the number of protons.
so in our atom above, carbon, it has 6 protons and 6 electrons. now, depending on what happens, the number of electrons can change, atoms can lose or gain electrons based on their reactivity and also how many valence electrons they may have. we're going to get into this shortly.
Let's look at what happens when the number of electrons changes.
let's look at fluorine atomic number of 9. this means that fluorine has 9 electrons and 9 protons. remember when reactions happen the number of electrons can change but usually the number of protons stays the same, unless we're dealing with some kind of nuclear decay, but essentially fluorine still stays fluorine when it gains an electron.
essentially if you look in the figure below, fluorine gains one electron, so before now we have a situation where flourine has 10 electrons now and 9 protons. this means that now it carries a net negative charge -1. see below in the figure. There is a name for this an ion with a negative charge is called an anion
see below. Comparing these two we can see that the number of electrons changed. we will get into this shortly as to why this happens.
now, here's an example of a cation. Some elements like to lose electrons, which I will get into later. they like losing electrons because they can get closer to achieving octet, a very important concept. but, Just take a look at what's happening below.
let's take a look at lithium, atomic number 3 which means it has 3 protons and 3 electrons. now lithium, will lose an electron so the lithium ion will have 2 electrons and 3 protons. now there are more protons than electron, so the net charge will be positive +1. The result here is a Cation.
Take a look at this below:
{img]http://image.prntscr.com/image/fe31ce44c9b64a84a14b693f79c156d2.png[/img]
Now the most straight forward way to explain cation and anions is this:
Metals like to lose electrons like Lithium while
non metals like fluorine like to gain electrons.
This is really the foundation behind metals and non metals, but there is another issue I will touch upon.
Also, remember that the atomic number = the number of protons/neutrons usually written at the bottom while, The mass number is the number of neutrons and protons in the nucleus denoted on top.
say if we had helium, the bottom number tells us that there are 2 electrons and 2 protons in our helium atom. right?
now look at the top we see the number 4.
If we subtract the mass number 4 from the atomic number 2 we get the number of neutrons which is 2.
Simple little formula here mass number Z- Atomic number A; Z-A
The basis of this is that elements will differ in the number of neutrons they have and that's called isotopes. The numbers you get on the periodic table for masses of the elements are actually a weighted average of all the naturally occurring isotopes. In every day language it's just the average of the isotopes that occur the most often.
Check this out below:
look at carbon, and the isotopes that it has. it's still carbon because it has 6 protons but the number of neutrons will be different. actually the way that I like to think about it is that the number of protons is the finger print or the identity of our element, because those are in the nucleus and we usually can't get to them. electrons move around, which i'll get into that but take a look at the concept of isotopes, their just different flavors of carbon with different #'s of neutrons.

The next thing I want to touch upon is the periodic table. Naturally there are three groups. metals which want to lose electrons, non-metals that want to gain electrons, and metalloids that have properties of both metals and non metals.
If you notice, the elements are organized into groups and periods. groups are vertical, and they are called families, they are organized by the same number of valence electrons. I'll get into this, this is very important.
periods are horizontal and those usually have the same number of shells. "Also i'll get into this too".
but there's something even more important, i said two things before:
Metals like to lose electrons
While non metals like to gain them?
Why?
The types of bonds elements make are what determine their reactivity as well as how many bonds they make as well. this all has to do with in what vertical column, group our elements are in the periodic table are.
In-fact, elements want to have a filled valence shell. what does this mean?
The valence shell is the last, outermost shell in our atom. that's where all the chemical reactions are happening. one thing i forgot to mention.
The nucleus is postiively charged right?
so what's going to happen is that the nucleus is going to be pulling the electrons because they are opposite, think opposites attract.
the closest you are to the nucleus, the stronger the pull. the farther you are from the nucleus the less these electrons will be pulled because they are farther away.
in-fact something that happens is called shielding. the electrons in the outermost shell are shielded most from the pull of the nucleus because they are so far out.
let's take oxygen for example, take a look at it. look at the valence shell. oxygen has 6 electrons there, so it's going to need 2 more to achieve something we call octet.
In-fact octet means that in the last shell, there are 8 valence electrons, OR the outermost shell is filled. This means that the element is happy and wont react further.
Let's look at this again. The electron(s) closest to the nucleus in oxygen are going to be held most tightly by the nucleus and thus harder to move.
the electrons in the valence electrons are not going to be held as tightly as the electrons that are close to the nucleus.
All elements would love to have a filled octet of 8 electrons, or something like it. so they will react accordingly.
here are the noble gases in group 8, they are largely un reactive because they are happy with the 8 valence electrons in their outermost shells.
metals and non metals will form different types of bond to try to achieve octet.
-NONMETALS will gain electrons to get closer to their configuration
-METALS will lose electrons to get closer to the configuration of a noble gas
This leads me to the next topic up for discussion.
Some definitions:
Aufbau principle = we build up meaning we put in electrons in the lowest energy levels first. also we take out electrons from the highest energy levels first, makes sense because farther away from nucleus means easier it is to take out electrons.
Hunds rule, when we put in electrons we put them in either all spin up or spin down.
TRANSLATION each electron is an arrow, and spin up means you draw the arrows pointing all up or down.
paulis exclusion principle: when we don't have enough electrons to fill the orbitals we try to make sure that each orbital has one electron.
There are other things that we have to consider too.
Remember in the beginning, I said orbitals are places where you can most likely find electrons; well yep; they come in different shapes too. also the periodic table is based on this.
Some more definitions the principle quantum number n = the energy level. the columns on the periodic table are the principle quantum numbers.
l = the shape of the orbital
mL = the orientation of that orbital it can go from +L, to -L but is never greater than L.
Ms = the spin, that's if the electron is +1/2 spin up or -1/2 spin down.
there are four types of orbitals
s orbital holds 2 electrons, only 1 orientation so L = 0, mL = 0, starts at n = 1
p orbital holds 6 electrons, three orientations so L = 1, mL = 0,+1,-1, starts at n =2
d orbital holds 10 electrons, 5 orientations, L =2, mL = 0,+1,-2,-1,+2, starts at n =3
f orbital holds 14 electrons, 7 orientations, L = 3, mL =0,1,2,3,-1,-2,-3 starts at n =4
This is how the periodic table is organized remember when we put in electrons we always put them in starting at 1s, then 2s, 2p, 3s, 3p, in that order until we've filled them completely.

Let's look at the different orbital types I didn't show f orbitals because usually in an intro course they don't really talk about them, maybe they do lol just not the course I took.

Now, Let's say if you wanted to make say carbon. carbon has 6 electrons.
let's start putting in those 6 electrons. We must always start with the 1s orbital
Below is the electron configuration of carbon, we always start filling at the lowest energy level first, the 1s orbital. remember each orbital holds a maximum of 2 electrons. we keep filling until we have put in 6 electrons. but notice something if we were to stop at any point before 6 we would get a different element.
*view http://prnt.sc/dfegt0 if you are having troubles reading the text*
Compare the configuration of the lithium ion, when lithium lost an electron to the lithium ion +1 that lost an electron to the nearest noble gas Helium. Lithium lost an electron to achieve a noble gas configuration while, fluorine lost it.
*view http://prnt.sc/dfejo5 if you are having troubles reading the text*
This leads up to the next topic; I'll limit the discussion between Polar covalent, non-polar covalent and ionic.
for the trends you've seen to happen elements have to give up or gain electrons by making some kind/(s) of bond/(s).
the number and types of bonds will depend on the number of valence electrons those said elements may have.
electrons are essentially the glue that holds molecules together, but all the different bond types are based on a something called electronegativity.
Electronegativity has to do with how badly an element wants an electron. the more electronegative element usually a nonmetal, will pull the electrons. depending on the electronegativity, electrons are either shared equally, unequally, or transferred.
let's look at the first example, electrons are shared equally
also, when electrons are shared between two atoms it's usually called a covalent bond.
two hydrogen atoms. they are shared equally because both atoms have the same electronegativity.

let's look at a scenario where the atoms have different electronegativity. take water for instance. In water the oxygen, remember it wants those electrons so badly, it's a non metal
of course it needs 2 electrons because it has 6 valence electrons and needs 8 to satisfy it.
because of this the electrons, spend more time at the oxygen than they do the hydrogens and because of this and the fact that the oxygen has a higher electronegativity, the bond is polar covalent.
the other type involves a metal and a non metal. and instead of a sharing electrons electrons are transferred from the metal to the non metal.
let's take a look at say Lithium chloride.
lithium transfers its single electron to chloride, because the electronegativity difference is so huge! and it's not really a bond per say. As we've discussed metals like to lose electrons and non metals like to gain them.
To help identify your types of bonds:
1. identify the elements in the bond.
2. are they both non metals or is there a metal and non metal.
3. look at the groups, vertical rows these elements reside in. by figuring out the # of valence electrons along with where they are in the periodic table, metal non metal etc you can figure out what type of bond is occurring.
4. also note the electronegativity difference, that's the central idea behind bonding.
Btw the lithium chloride is an ionic bond.
Periodic trends: the basics: This will touch on some basics too:
Will limit this discussion to atomic radius and electronegativity:
*I didn't get around to mention ionization energy, electron affinity etc.
Atomic Radius: it's exactly what it implies. Radius meaning half way, Atomic Atom so basically it's just the radius of the atom. As you go down a group, hopefully the discussion before was sufficient to explain shells/orbitals or some basics, the atomic number gets bigger and the number of shells increases. remember these two things are related. can't have more electrons w/o more shells.
*view http://prnt.sc/dfemh7 if you are having troubles reading the text*
Electronegativity. if we were to go down a group see the picture above, well my poorly drawn picture at least, you'll notice that with more shells, the electrons become more less tightly held. there's greater shielding happening, more electrons and the nucleus cant hold on to the outermost electrons as tightly so that's part of the reason why electronegativity goes down as you down a group.
What about a-cross a period?
as we go across the period, atomic radius goes down because of something very interesting: as we go across say a period, the number of shells stays the same while the number of protons goes up. this means that there is more protons as well, and the pull of the nucleus gets stronger. so what happens is two things. the atomic radius goes down and the electronegativity goes up!
*view http://prnt.sc/dfenbw if you are having troubles reading the text*
We would expect Lithium to have a higher electronegativity and smaller atomic radius than say Rubidium in the same group.
*view http://prnt.sc/dfeoke if you are having troubles reading the text*
across a period electronegativity goes up and atomic radius goes down. though there may be some exceptions to this when we consider the transition metals groups 3-12.
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